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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
71
accessible chromatin
62
target gene predictions
53
chromatin state
14
binding sites
9
histone modifications
5
eQTL
4
gene expression
3
Fine-mapped variants
2
variant allelic effects
Date released
149
September, 2022
72
February, 2021
24
February, 2023
22
November, 2022
15
June, 2020
10
November, 2021
6
May, 2021
4
February, 2024
4
March, 2020
4
October, 2022
3
August, 2017
3
February, 2020
3
January, 2020
3
January, 2022
2
March, 2024
2
May, 2020
Available data
264
bed bed3+
50
bed bed9
39
bigWig
9
tsv
Organism
326
Homo sapiens
Biosample type
240
tissue
47
cell line
33
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
316
AMP
10
ENCODE
Genome assembly (visualization)
318
hg19
72
GRCh38
BIOSAMPLE
TYPE
326 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
1
14
13
1
retina
6
23
3
3
1
1
1
1
1
spinal cord
14
1
8
7
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
+ See 13 more…
cell line
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 7 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
2
1
colon epithelial cell
3
3
iris pigment epithelial cell
2
1
1
1
astrocyte of the spinal cord
2
1
1
fibroblast of the conjunctiva
2
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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