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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
candidate regulatory elements
79
target gene predictions
76
chromatin state
52
accessible chromatin
46
gene expression
20
binding sites
20
histone modifications
16
eQTL
15
Fine-mapped variants
14
variant allelic effects
4
differential activity
3
caQTL
Date released
178
September, 2022
83
February, 2021
34
February, 2024
28
March, 2020
18
August, 2021
16
January, 2020
15
November, 2021
14
February, 2020
14
May, 2020
12
June, 2020
8
May, 2021
6
April, 2019
5
January, 2022
4
March, 2023
4
November, 2019
3
August, 2017
3
February, 2023
2
May, 2022
2
October, 2019
2
October, 2022
1
July, 2020
1
May, 2019
1
September, 2018
Available data
303
bed bed3+
68
bed bed9
62
tsv
45
bigWig
11
bigBed bed9
3
csv
1
bam
Organism
454
Homo sapiens
Biosample type
308
tissue
98
primary cell
40
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
439
AMP
15
ENCODE
Genome assembly (visualization)
394
hg19
166
GRCh38
2
hg18
BIOSAMPLE
TYPE
454 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
heart
37
20
21
5
3
1
1
2
liver
13
10
9
4
1
1
2
7
1
1
heart left ventricle
11
7
8
3
1
1
1
2
spinal cord
14
8
7
1
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 13 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of cardiac tissue
3
4
3
2
hepatic stellate cell
1
1
1
3
1
1
1
astrocyte of the spinal cord
2
1
1
+ See 11 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
cardiac fibroblast
1
See all biosamples
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