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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
candidate regulatory elements
131
target gene predictions
100
accessible chromatin
92
chromatin state
52
gene expression
39
binding sites
30
histone modifications
25
eQTL
16
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
242
September, 2022
164
February, 2021
56
November, 2021
29
June, 2020
22
May, 2021
21
February, 2024
17
September, 2023
14
October, 2022
13
March, 2020
11
August, 2021
11
January, 2020
10
August, 2017
10
February, 2020
10
May, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
496
bed bed3+
82
bed bed9
72
tsv
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
677
Homo sapiens
Biosample type
293
primary cell
265
tissue
68
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
595
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
598
hg19
178
GRCh38
2
hg18
BIOSAMPLE
TYPE
677 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 46 more…
tissue
large intestine
27
14
1
13
1
adipose tissue
7
8
2
6
3
1
4
1
spinal cord
14
8
1
7
1
sigmoid colon
10
7
1
5
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
+ See 20 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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