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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
214
accessible chromatin
130
target gene predictions
115
candidate regulatory elements
92
differential activity
59
chromatin state
44
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
206
February, 2021
169
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
May, 2022
2
November, 2019
January, 2022
1
July, 2020
Available data
573
bed bed3+
325
tsv
177
bigWig
78
txt
56
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
982
Homo sapiens
Biosample type
819
primary cell
94
tissue
43
cell line
26
in vitro differentiated cells
Organ
949
epithelium
651
kidney
452
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
671
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
632
hg19
241
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
982 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 146 more…
tissue
spleen
1
2
8
15
6
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
+ See 16 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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