Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
candidate regulatory elements
75
target gene predictions
72
chromatin state
46
accessible chromatin
37
gene expression
25
binding sites
18
differential activity
15
variant allelic effects
13
histone modifications
9
Fine-mapped variants
8
eQTL
3
caQTL
Date released
192
September, 2022
92
February, 2021
35
September, 2023
17
February, 2024
16
January, 2020
15
May, 2020
13
June, 2020
13
March, 2020
8
November, 2021
7
May, 2021
5
February, 2020
5
January, 2022
5
October, 2022
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
2
March, 2024
2
October, 2019
1
August, 2017
1
August, 2021
1
May, 2019
Available data
300
bed bed3+
71
bed bed9
65
tsv
34
bigWig
8
bigBed bed9
2
txt
Organism
445
Homo sapiens
Biosample type
216
tissue
208
primary cell
14
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
399
AMP
35
KPMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
380
hg19
131
GRCh38
BIOSAMPLE
TYPE
445 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
tissue
placenta
26
15
14
1
1
2
1
spleen
15
8
6
2
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
+ See 11 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 36 more…
cell line
smooth muscle cell of the coronary artery
1
1
1
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
vein endothelial cell
1
1
in vitro differentiated cells
trophoblast cell
2
2
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download