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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
candidate regulatory elements
58
target gene predictions
47
chromatin state
13
accessible chromatin
7
binding sites
6
histone modifications
4
gene expression
3
eQTL
Date released
131
September, 2022
61
February, 2021
10
June, 2020
6
May, 2021
6
November, 2021
4
February, 2024
4
March, 2024
3
August, 2017
3
January, 2022
2
March, 2020
November, 2019
1
October, 2022
Available data
180
bed bed3+
44
bed bed9
4
tsv
3
bigWig
Organism
231
Homo sapiens
Biosample type
185
tissue
40
cell line
6
primary cell
Organ
948
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
225
AMP
6
ENCODE
Genome assembly (visualization)
224
hg19
56
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
231 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
27
14
13
1
1
spleen
15
8
6
1
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 11 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
GM18507
1
2
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
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