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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
108
target gene predictions
96
accessible chromatin
72
chromatin state
51
gene expression
binding sites
26
histone modifications
20
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
189
September, 2022
118
February, 2021
59
November, 2021
23
June, 2020
20
February, 2024
18
May, 2021
17
September, 2023
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
392
bed bed3+
65
tsv
64
bed bed9
60
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
546
Homo sapiens
Biosample type
271
primary cell
202
tissue
47
in vitro differentiated cells
25
cell line
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
463
AMP
59
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
472
hg19
155
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
546 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
osteoblast
2
2
5
1
2
2
fibroblast of cardiac tissue
3
4
2
3
+ See 48 more…
tissue
stomach
40
21
3
19
1
1
1
adipose tissue
7
8
2
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
stomach smooth muscle
4
2
3
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
2
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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