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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
290
candidate regulatory elements
252
gene expression
183
target gene predictions
149
chromatin state
146
accessible chromatin
70
differential activity
38
binding sites
34
variant allelic effects
32
histone modifications
26
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
414
September, 2022
326
February, 2021
157
September, 2023
62
November, 2021
38
August, 2021
38
June, 2020
29
May, 2020
24
January, 2020
21
February, 2024
18
February, 2020
18
May, 2021
14
October, 2022
13
March, 2020
8
August, 2017
8
January, 2022
7
March, 2023
7
November, 2022
4
March, 2024
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
732
bed bed3+
317
tsv
141
bed bed9
96
bigWig
93
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
1230
Homo sapiens
Biosample type
602
primary cell
504
tissue
72
cell line
51
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1002
AMP
155
KPMP
62
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
890
hg19
260
GRCh38
2
hg18
BIOSAMPLE
TYPE
1230 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
pericyte cell
1
10
1
10
glomerular endothelial cell
2
14
1
1
2
1
osteoblast
2
2
2
1
5
3
2
+ See 116 more…
tissue
stomach
40
1
21
19
3
1
1
kidney
29
7
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 32 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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