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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
candidate regulatory elements
83
target gene predictions
65
gene expression
41
accessible chromatin
37
differential activity
17
variant allelic effects
16
eQTL
14
histone modifications
12
binding sites
8
chromatin state
2
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
104
September, 2022
85
February, 2021
51
March, 2023
38
May, 2021
23
February, 2024
20
January, 2021
15
August, 2021
14
March, 2020
12
June, 2020
7
August, 2017
7
August, 2018
7
May, 2020
3
January, 2020
2
February, 2020
2
March, 2024
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
Available data
272
bed bed3+
89
tsv
24
bigWig
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
398
Homo sapiens
Biosample type
207
tissue
132
primary cell
50
cell line
9
in vitro differentiated cells
Organ
715
epithelium
547
kidney
338
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
376
AMP
20
T1D
2
community
Genome assembly (visualization)
426
hg19
GRCh38
2
hg18
assembly!
GRCh38
BIOSAMPLE
TYPE
398 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
differential activity
variant allelic effects
eQTL
histone modifications
binding sites
chromatin state
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
stomach
40
21
1
3
1
liver
13
10
1
2
1
6
2
1
2
1
islet of Langerhans
1
11
2
1
10
1
2
3
2
2
2
body of pancreas
8
5
2
1
pancreas
5
5
2
1
1
1
1
+ See 7 more…
primary cell
hepatocyte
1
2
8
1
2
1
1
pancreatic ductal cell
2
3
3
3
1
2
1
pancreatic alpha cell
3
3
4
3
1
pancreatic beta cell
3
3
4
3
1
pancreatic delta cell
3
3
4
3
1
+ See 17 more…
cell line
EndoC_BH1
1
8
7
3
1
HepG2
2
3
1
1
3
1
HuH-7
1
1
1
1
1
Panc1
2
2
8988T
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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