Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
candidate regulatory elements
107
target gene predictions
94
chromatin state
35
accessible chromatin
12
gene expression
9
variant allelic effects
8
eQTL
8
histone modifications
7
binding sites
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
264
September, 2022
115
February, 2021
20
November, 2021
17
February, 2024
10
March, 2020
9
June, 2020
8
May, 2021
6
February, 2020
5
January, 2020
5
May, 2020
3
August, 2017
3
March, 2024
3
May, 2022
3
October, 2022
2
January, 2022
2
May, 2019
1
August, 2021
1
October, 2019
Available data
361
bed bed3+
91
bed bed9
21
bigWig
15
tsv
3
bigBed bed9
Organism
477
Homo sapiens
Biosample type
397
tissue
61
primary cell
17
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
457
AMP
20
ENCODE
Genome assembly (visualization)
467
hg19
126
GRCh38
BIOSAMPLE
TYPE
477 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
variant allelic effects
eQTL
histone modifications
binding sites
Fine-mapped variants
caQTL
differential activity
tissue
stomach
40
21
19
3
1
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
+ See 21 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
skeletal muscle cell
2
1
1
1
1
+ See 9 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
See all biosamples
Download