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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
accessible chromatin
93
candidate regulatory elements
83
target gene predictions
51
gene expression
50
chromatin state
33
differential activity
17
eQTL
15
variant allelic effects
11
binding sites
11
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
140
September, 2022
77
February, 2021
47
March, 2023
35
May, 2021
31
November, 2021
28
February, 2024
25
February, 2023
22
November, 2022
20
January, 2021
June, 2020
10
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
5
January, 2022
4
August, 2017
4
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
Available data
337
bed bed3+
98
bigWig
80
tsv
45
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
492
Homo sapiens
Biosample type
284
tissue
157
primary cell
42
cell line
9
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
439
AMP
31
ENCODE
20
T1D
2
community
Genome assembly (visualization)
396
hg19
110
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
492 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
stomach
40
21
1
19
1
1
islet of Langerhans
5
1
11
3
13
1
2
1
2
2
2
retina
22
6
3
1
3
1
1
1
1
body of pancreas
8
5
2
4
1
1
3
pancreas
3
5
5
3
1
1
1
1
+ See 16 more…
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
5
3
3
3
1
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 23 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
2
1
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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