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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
candidate regulatory elements
78
target gene predictions
74
accessible chromatin
51
gene expression
45
chromatin state
33
differential activity
18
eQTL
13
variant allelic effects
8
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
125
September, 2022
68
February, 2021
47
March, 2023
35
May, 2021
27
February, 2024
27
November, 2021
20
January, 2021
10
March, 2020
9
June, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
3
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
June, 2021
1
October, 2022
Available data
270
bed bed3+
79
tsv
61
bigWig
40
bed bed9
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
421
Homo sapiens
Biosample type
240
tissue
137
primary cell
41
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
372
AMP
27
ENCODE
20
T1D
2
community
Genome assembly (visualization)
324
hg19
100
GRCh38
month_released!
June, 2021
BIOSAMPLE
TYPE
421 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
stomach
40
21
3
1
19
1
1
islet of Langerhans
1
6
11
3
13
1
2
1
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
testis
7
3
1
1
3
1
1
1
+ See 13 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 18 more…
cell line
EndoC_BH1
1
8
8
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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