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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
candidate regulatory elements
205
gene expression
114
target gene predictions
109
chromatin state
60
accessible chromatin
56
differential activity
18
variant allelic effects
9
binding sites
7
eQTL
7
histone modifications
3
Fine-mapped variants
Date released
318
September, 2022
226
February, 2021
140
September, 2023
28
August, 2021
20
June, 2020
19
May, 2020
15
January, 2020
12
November, 2021
10
February, 2020
7
March, 2020
4
March, 2024
3
February, 2024
3
January, 2022
3
May, 2021
3
October, 2022
1
April, 2019
1
August, 2017
1
May, 2019
Available data
431
bed bed3+
258
tsv
108
bed bed9
87
txt
41
bigWig
2
bigBed bed9
Organism
814
Homo sapiens
Biosample type
445
tissue
324
primary cell
44
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
662
AMP
140
KPMP
12
ENCODE
Genome assembly (visualization)
544
hg19
151
GRCh38
BIOSAMPLE
TYPE
814 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
tissue
stomach
40
1
21
19
3
1
1
kidney
29
7
14
16
10
1
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 23 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 69 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 8 more…
in vitro differentiated cells
renal cell carcinoma
1
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