Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
40
accessible chromatin
40
target gene predictions
36
chromatin state
29
gene expression
24
binding sites
21
histone modifications
10
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
100
September, 2022
70
February, 2021
29
February, 2024
12
June, 2020
10
August, 2021
10
March, 2020
6
November, 2021
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
January, 2022
3
May, 2021
3
May, 2022
3
October, 2022
2
February, 2020
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
188
bed bed3+
33
tsv
32
bed bed9
32
bigWig
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
269
Homo sapiens
Biosample type
98
tissue
88
cell line
76
primary cell
7
in vitro differentiated cells
Organ
929
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
257
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
263
AMP
6
ENCODE
T1D
Genome assembly (visualization)
230
hg19
89
GRCh38
2
hg18
award.project!
T1D
BIOSAMPLE
TYPE
269 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
4
10
9
1
1
2
7
1
1
testis
7
1
3
3
1
1
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
+ See 10 more…
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
OCI-LY1
2
1
1
1
1
+ See 12 more…
primary cell
hepatocyte
1
8
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download