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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
108
target gene predictions
79
chromatin state
78
binding sites
65
accessible chromatin
41
gene expression
40
histone modifications
18
differential activity
15
variant allelic effects
10
eQTL
9
Fine-mapped variants
3
caQTL
1
pQTL
Date released
204
September, 2022
167
February, 2021
45
February, 2024
35
September, 2023
25
June, 2020
25
October, 2022
16
January, 2020
16
May, 2020
12
March, 2020
7
May, 2021
7
November, 2021
5
February, 2020
5
January, 2022
4
August, 2021
4
February, 2023
4
March, 2023
3
April, 2020
3
August, 2017
3
November, 2019
2
January, 2021
2
March, 2024
2
October, 2019
1
May, 2019
1
May, 2022
Available data
442
bed bed3+
75
bed bed9
69
tsv
41
bigWig
8
bigBed bed9
2
txt
1
bed bed9+
Organism
598
Homo sapiens
Biosample type
276
cell line
193
primary cell
127
tissue
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
551
AMP
35
KPMP
7
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
529
hg19
169
GRCh38
BIOSAMPLE
TYPE
598 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 43 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
2
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 36 more…
tissue
coronary artery
3
3
3
3
1
2
2
3
1
tibial artery
3
2
3
3
1
2
2
3
testis
7
3
3
1
1
1
1
1
ascending aorta
4
2
3
1
1
1
1
3
aorta
4
4
4
1
+ See 19 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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