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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
candidate regulatory elements
95
target gene predictions
94
accessible chromatin
65
chromatin state
50
gene expression
34
binding sites
26
histone modifications
21
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
171
September, 2022
135
February, 2021
50
November, 2021
23
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
13
January, 2020
13
May, 2020
13
October, 2022
11
August, 2021
9
February, 2020
9
March, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
400
bed bed3+
64
tsv
58
bed bed9
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
548
Homo sapiens
Biosample type
282
primary cell
177
tissue
50
in vitro differentiated cells
38
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
474
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
474
hg19
144
GRCh38
2
hg18
BIOSAMPLE
TYPE
548 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 44 more…
tissue
renal pelvis
19
9
2
9
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
testis
7
3
1
3
1
1
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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