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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
69
target gene predictions
56
chromatin state
39
accessible chromatin
34
binding sites
28
histone modifications
27
gene expression
13
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
160
September, 2022
102
February, 2021
30
February, 2024
15
June, 2020
15
November, 2021
10
August, 2021
10
March, 2020
8
May, 2021
6
January, 2022
6
October, 2022
4
August, 2017
4
March, 2023
3
January, 2020
3
March, 2024
3
May, 2020
2
February, 2020
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
285
bed bed3+
52
bed bed9
31
tsv
28
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
386
Homo sapiens
Biosample type
164
primary cell
105
cell line
101
tissue
16
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
371
AMP
15
ENCODE
Genome assembly (visualization)
346
hg19
113
GRCh38
2
hg18
BIOSAMPLE
TYPE
386 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
3
1
8
1
4
13
2
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
endothelial cell of hepatic sinusoid
6
6
4
foreskin fibroblast
6
2
1
1
4
2
+ See 14 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
RPMI7951
2
1
1
1
+ See 21 more…
tissue
liver
13
10
9
4
1
2
1
7
1
1
testis
7
3
3
1
1
1
1
1
lower leg skin
6
2
2
right lobe of liver
2
1
1
1
1
3
skin of body
1
1
1
3
+ See 5 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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