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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
43
candidate regulatory elements
34
target gene predictions
28
chromatin state
24
gene expression
21
accessible chromatin
15
histone modifications
14
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
79
September, 2022
37
February, 2021
29
February, 2024
11
March, 2020
10
August, 2021
6
June, 2020
4
March, 2023
4
May, 2020
4
May, 2021
3
August, 2017
3
January, 2020
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
133
bed bed3+
28
tsv
25
bed bed9
19
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
199
Homo sapiens
Biosample type
106
tissue
58
primary cell
28
cell line
7
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
199
AMP
6
ENCODE
Genome assembly (visualization)
167
hg19
66
GRCh38
2
hg18
BIOSAMPLE
TYPE
199 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
10
9
1
4
2
1
7
1
1
thymus
20
14
11
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
2
1
13
7
4
1
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
1
1
2
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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