Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
candidate regulatory elements
55
target gene predictions
47
chromatin state
7
binding sites
6
histone modifications
2
eQTL
2
gene expression
Date released
131
September, 2022
57
February, 2021
June, 2020
6
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2020
2
March, 2024
1
May, 2020
1
October, 2022
Available data
160
bed bed3+
44
bed bed9
2
tsv
Organism
208
Homo sapiens
Biosample type
178
tissue
30
cell line
primary cell
Organ
411
brain
333
kidney
319
musculature of body
271
lung
256
intestine
237
limb
219
heart
198
bodily fluid
187
blood
185
embryo
168
connective tissue
161
large intestine
148
pancreas
120
epithelium
105
stomach
103
extraembryonic component
98
skin of body
94
vasculature
90
liver
89
blood vessel
87
adipose tissue
82
eye
79
small intestine
77
uterus
70
bone element
63
prostate gland
63
ureter
62
placenta
61
adrenal gland
54
lymph node
47
thymus
45
artery
43
gonad
39
mammary gland
37
spinal cord
33
esophagus
33
spleen
24
nerve
23
testis
22
lymphoid tissue
21
penis
20
ovary
19
thyroid gland
18
skeleton
14
mouth
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
3
lymphatic vessel
3
nose
3
vein
Project
208
AMP
Genome assembly (visualization)
204
hg19
48
GRCh38
month_released!
June, 2020
biosample_type!
primary cell
BIOSAMPLE
TYPE
208 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
thymus
20
14
11
1
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
See all biosamples
Download