Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
target gene predictions
147
candidate regulatory elements
102
accessible chromatin
86
chromatin state
78
binding sites
51
histone modifications
50
gene expression
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
3
pQTL
2
caQTL
Date released
228
September, 2022
194
February, 2021
51
November, 2021
46
February, 2024
33
June, 2020
31
October, 2022
21
May, 2021
17
September, 2023
14
August, 2021
11
May, 2020
10
January, 2020
10
March, 2020
9
August, 2017
9
February, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
558
bed bed3+
77
bed bed9
64
tsv
56
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
725
Homo sapiens
Biosample type
291
primary cell
236
cell line
147
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
650
AMP
51
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
653
hg19
187
GRCh38
2
hg18
BIOSAMPLE
TYPE
725 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
1
3
2
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
+ See 46 more…
cell line
K562
23
7
1
7
2
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 38 more…
tissue
thymus
14
20
1
11
1
1
adipose tissue
8
7
2
6
1
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download