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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
target gene predictions
124
candidate regulatory elements
66
chromatin state
60
binding sites
37
histone modifications
26
accessible chromatin
11
gene expression
2
eQTL
1
pQTL
Date released
189
September, 2022
138
February, 2021
79
February, 2024
23
June, 2020
20
October, 2022
12
May, 2021
11
August, 2021
3
August, 2017
3
November, 2021
2
March, 2020
1
March, 2024
1
May, 2020
Available data
406
bed bed3+
63
bed bed9
11
tsv
3
bigWig
Organism
482
Homo sapiens
Biosample type
332
cell line
87
tissue
32
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
479
AMP
3
ENCODE
Genome assembly (visualization)
471
hg19
145
GRCh38
BIOSAMPLE
TYPE
482 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
pQTL
cell line
H1-hESC
39
1
1
2
1
1
8
K562
23
7
7
2
1
1
GM12878
8
2
2
2
1
1
H9
8
7
1
GM06990
1
2
1
2
1
1
+ See 45 more…
tissue
thymus
14
20
11
1
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
blood
2
+ See 5 more…
primary cell
trophoblast cell
5
7
4
1
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
primordial germ cell
1
1
fetal thymocyte
1
+ See 2 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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