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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
candidate regulatory elements
71
target gene predictions
61
chromatin state
35
accessible chromatin
24
gene expression
20
histone modifications
17
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
178
September, 2022
70
February, 2021
29
February, 2024
12
June, 2020
11
March, 2020
10
August, 2021
9
November, 2021
7
May, 2021
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
2
February, 2020
2
January, 2022
2
May, 2022
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
251
bed bed3+
58
bed bed9
28
tsv
27
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
351
Homo sapiens
Biosample type
204
tissue
104
primary cell
31
cell line
12
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
342
AMP
9
ENCODE
Genome assembly (visualization)
318
hg19
109
GRCh38
2
hg18
BIOSAMPLE
TYPE
351 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
2
1
1
liver
13
10
9
4
1
2
1
7
1
1
thymus
20
14
11
1
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
+ See 4 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
+ See 11 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
trophoblast cell
2
2
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
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