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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
213
accessible chromatin
169
gene expression
125
target gene predictions
92
differential activity
57
chromatin state
52
candidate regulatory elements
40
variant allelic effects
11
binding sites
4
eQTL
4
histone modifications
2
caQTL
Date released
February, 2021
163
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
446
bed bed3+
240
tsv
173
bigWig
54
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
769
Homo sapiens
Biosample type
655
primary cell
65
tissue
29
cell line
20
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
458
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
503
hg19
239
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
769 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
chromatin state
candidate regulatory elements
variant allelic effects
binding sites
eQTL
histone modifications
caQTL
primary cell
endothelial cell
15
5
7
2
1
2
hepatocyte
8
10
3
1
1
2
3
pancreatic beta cell
8
3
2
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 129 more…
tissue
pigmented layer of retina
20
thyroid gland
1
5
4
4
1
breast epithelium
1
3
2
2
esophagus squamous epithelium
1
2
2
2
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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