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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
accessible chromatin
45
candidate regulatory elements
28
target gene predictions
23
chromatin state
15
eQTL
15
gene expression
8
binding sites
6
Fine-mapped variants
6
variant allelic effects
5
histone modifications
2
differential activity
Date released
63
September, 2022
44
February, 2021
24
February, 2023
23
November, 2022
8
June, 2020
8
March, 2020
7
February, 2020
6
August, 2021
6
January, 2020
6
November, 2021
5
May, 2020
4
February, 2024
4
January, 2022
4
May, 2021
2
August, 2017
2
October, 2022
2
September, 2018
1
January, 2018
1
March, 2024
Available data
164
bed bed3+
42
bigWig
25
tsv
21
bed bed9
1
bigBed bed9
Organism
221
Homo sapiens
Biosample type
174
tissue
27
primary cell
13
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
215
AMP
6
ENCODE
Genome assembly (visualization)
197
hg19
46
GRCh38
2
hg18
BIOSAMPLE
TYPE
221 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
binding sites
Fine-mapped variants
variant allelic effects
histone modifications
differential activity
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
4
3
1
1
subcutaneous adipose tissue
2
2
1
6
5
3
1
1
pigmented layer of retina
20
thyroid gland
1
8
5
4
1
+ See 9 more…
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
thyroid follicular cell
1
1
1
Muller cell
2
+ See 3 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
adipose tissue derived mesenchymal stem cell
1
1
adipose-derived mesenchymal stem cell
1
fibroblast of the conjunctiva
1
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
white adipose cell
1
See all biosamples
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