Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
46
target gene predictions
38
chromatin state
11
accessible chromatin
6
binding sites
5
histone modifications
Date released
104
September, 2022
48
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
1
March, 2020
1
October, 2022
Available data
144
bed bed3+
35
bed bed9
3
bigWig
Organism
179
Homo sapiens
Biosample type
139
tissue
34
cell line
6
primary cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
173
AMP
6
ENCODE
Genome assembly (visualization)
179
hg19
45
GRCh38
BIOSAMPLE
TYPE
179 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download