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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
101
target gene predictions
63
chromatin state
51
binding sites
29
histone modifications
23
accessible chromatin
4
eQTL
4
gene expression
Date released
173
September, 2022
118
February, 2021
31
February, 2024
20
June, 2020
20
October, 2022
9
May, 2021
6
November, 2021
5
August, 2017
4
March, 2024
2
August, 2021
2
January, 2022
1
March, 2020
Available data
325
bed bed3+
58
bed bed9
4
tsv
3
bigWig
Organism
391
Homo sapiens
Biosample type
229
cell line
147
tissue
15
primary cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
385
AMP
6
ENCODE
Genome assembly (visualization)
385
hg19
96
GRCh38
BIOSAMPLE
TYPE
391 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 31 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 11 more…
primary cell
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
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