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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
target gene predictions
60
candidate regulatory elements
50
binding sites
27
histone modifications
18
accessible chromatin
5
eQTL
3
gene expression
2
chromatin state
Date released
86
February, 2021
62
September, 2022
28
February, 2024
20
October, 2022
17
June, 2020
5
May, 2021
3
January, 2022
3
March, 2024
2
August, 2017
2
August, 2021
2
November, 2021
1
March, 2020
Available data
223
bed bed3+
bed bed9
3
tsv
1
bigWig
Organism
231
Homo sapiens
Biosample type
178
cell line
35
tissue
18
primary cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
229
AMP
2
ENCODE
Genome assembly (visualization)
225
hg19
33
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
231 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
chromatin state
cell line
K562
23
7
2
1
1
1
GM12878
8
2
2
1
1
1
GM06990
1
2
2
1
1
GM19240
2
1
2
1
1
HAP-1
2
2
1
1
1
+ See 25 more…
tissue
ovary
6
8
1
1
1
testis
3
7
1
1
1
1
1
blood
2
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
tracheal epithelial cell
2
2
1
peripheral blood stem cell
1
1
1
luteal cell
1
1
Leydig cell
1
+ See 1 more…
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