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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
40
accessible chromatin
37
target gene predictions
32
chromatin state
gene expression
23
binding sites
22
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
88
September, 2022
58
February, 2021
17
February, 2024
11
June, 2020
10
August, 2021
6
March, 2020
6
November, 2021
4
May, 2020
3
August, 2017
3
March, 2023
3
May, 2021
3
May, 2022
2
January, 2020
2
January, 2021
2
October, 2022
1
February, 2020
1
January, 2022
1
November, 2019
1
September, 2018
Available data
176
bed bed3+
28
bed bed9
24
bigWig
8
tsv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
222
Homo sapiens
Biosample type
81
cell line
74
tissue
63
primary cell
4
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
214
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
214
hg19
74
GRCh38
2
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
222 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
tissue
liver
13
4
10
9
1
2
7
1
1
right lobe of liver
2
1
1
1
3
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
+ See 8 more…
primary cell
hepatocyte
1
8
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
1
3
1
1
1
1
tracheal epithelial cell
1
2
2
megakaryocyte
2
2
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
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