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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
accessible chromatin
72
gene expression
65
target gene predictions
47
candidate regulatory elements
37
differential activity
34
chromatin state
23
eQTL
histone modifications
20
binding sites
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
86
September, 2022
54
February, 2024
51
March, 2023
46
February, 2021
36
May, 2021
23
November, 2021
20
January, 2021
19
March, 2020
15
August, 2021
10
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
5
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
243
bed bed3+
104
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
416
Homo sapiens
Biosample type
184
primary cell
168
tissue
54
cell line
10
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
371
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
293
hg19
114
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
416 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
3
1
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 18 more…
tissue
liver
4
1
10
13
1
9
7
1
1
islet of Langerhans
6
11
1
3
13
2
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
3
HuH-7
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 4 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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