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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
gene expression
22
accessible chromatin
19
candidate regulatory elements
16
target gene predictions
13
chromatin state
10
binding sites
9
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
Fine-mapped variants
1
caQTL
Date released
33
September, 2022
29
February, 2024
22
February, 2021
9
August, 2021
6
March, 2020
5
November, 2021
4
June, 2020
4
March, 2023
3
January, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
81
bed bed3+
25
tsv
22
bigWig
11
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
130
Homo sapiens
Biosample type
68
primary cell
55
tissue
cell line
7
in vitro differentiated cells
Organ
906
epithelium
611
kidney
423
connective tissue
353
brain
352
musculature of body
255
intestine
246
vasculature
238
pancreas
237
heart
228
limb
215
lung
189
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
125
liver
119
stomach
99
eye
88
embryo
84
small intestine
80
adipose tissue
73
adrenal gland
70
placenta
65
artery
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
37
spinal cord
36
bone element
34
spleen
25
prostate gland
23
ovary
23
thyroid gland
22
nerve
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
125
AMP
5
ENCODE
Genome assembly (visualization)
99
hg19
49
GRCh38
1
hg18
biosample_type!
cell line
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
130 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
caQTL
primary cell
hepatocyte
13
8
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
1
tracheal epithelial cell
1
2
2
pancreatic endothelial cell
1
3
+ See 1 more…
tissue
liver
1
4
13
10
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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