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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
216
accessible chromatin
135
target gene predictions
131
candidate regulatory elements
92
differential activity
44
variant allelic effects
43
binding sites
28
histone modifications
3
chromatin state
3
eQTL
2
caQTL
Date released
214
February, 2021
155
September, 2023
129
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
18
May, 2020
15
January, 2020
15
November, 2022
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
598
bed bed3+
324
tsv
179
bigWig
78
txt
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
950
Homo sapiens
Biosample type
775
primary cell
108
tissue
42
cell line
25
in vitro differentiated cells
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
639
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
601
hg19
187
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
950 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
variant allelic effects
binding sites
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 146 more…
tissue
renal pelvis
2
9
19
1
pigmented layer of retina
20
left renal pelvis
1
2
6
1
right renal pelvis
1
2
6
1
breast epithelium
1
3
5
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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