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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
57
target gene predictions
49
chromatin state
14
accessible chromatin
6
binding sites
5
histone modifications
variant allelic effects
2
eQTL
2
gene expression
Date released
137
September, 2022
64
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2020
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
185
bed bed3+
46
bed bed9
6
bigWig
2
tsv
Organism
235
Homo sapiens
Biosample type
195
tissue
34
cell line
6
primary cell
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
229
AMP
6
ENCODE
Genome assembly (visualization)
231
hg19
59
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
235 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
renal pelvis
19
9
9
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
left renal pelvis
6
2
2
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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