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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
57
target gene predictions
55
candidate regulatory elements
48
gene expression
33
differential activity
30
chromatin state
15
eQTL
14
variant allelic effects
6
histone modifications
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
83
September, 2022
49
February, 2021
45
March, 2023
33
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
May, 2020
8
August, 2021
7
August, 2018
7
January, 2020
6
March, 2020
6
October, 2019
5
June, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
210
bed bed3+
73
tsv
60
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
336
Homo sapiens
Biosample type
173
tissue
126
primary cell
34
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
296
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
247
hg19
74
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
336 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
1
2
2
2
renal pelvis
2
9
19
9
1
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
2
4
1
1
endocrine pancreas
4
7
4
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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