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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
57
target gene predictions
55
candidate regulatory elements
48
gene expression
33
differential activity
chromatin state
15
eQTL
14
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
57
September, 2022
49
February, 2021
47
March, 2023
33
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
9
May, 2020
8
August, 2021
7
August, 2018
7
January, 2020
6
October, 2019
5
June, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
206
bed bed3+
76
tsv
60
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
311
Homo sapiens
Biosample type
151
tissue
126
primary cell
31
cell line
3
in vitro differentiated cells
Organ
896
epithelium
575
kidney
410
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
271
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
220
hg19
51
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
311 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
13
1
1
2
2
2
2
renal pelvis
2
9
19
1
body of pancreas
5
8
2
1
1
3
pancreas
5
5
5
1
1
1
1
endocrine pancreas
4
7
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
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