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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
57
target gene predictions
55
candidate regulatory elements
48
gene expression
33
differential activity
30
chromatin state
eQTL
14
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
83
September, 2022
48
February, 2021
46
March, 2023
33
May, 2021
24
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
October, 2019
5
June, 2020
3
August, 2017
2
November, 2019
1
April, 2019
1
August, 2021
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
209
bed bed3+
75
tsv
60
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
326
Homo sapiens
Biosample type
163
tissue
126
primary cell
34
cell line
3
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
286
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
240
hg19
72
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
326 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
renal pelvis
2
9
19
9
1
islet of Langerhans
6
1
11
3
1
1
2
2
2
2
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
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