Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
accessible chromatin
73
candidate regulatory elements
66
target gene predictions
49
gene expression
39
chromatin state
33
differential activity
16
eQTL
16
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
110
September, 2022
66
February, 2021
47
March, 2023
33
May, 2021
26
February, 2024
25
February, 2023
22
November, 2021
22
November, 2022
20
January, 2021
11
June, 2020
11
May, 2020
9
January, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
October, 2019
4
February, 2020
4
January, 2022
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
Available data
308
bed bed3+
96
bigWig
78
tsv
35
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
450
Homo sapiens
Biosample type
248
tissue
149
primary cell
44
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
406
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
357
hg19
93
GRCh38
BIOSAMPLE
TYPE
450 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
renal pelvis
2
19
9
9
1
retina
23
6
3
1
3
1
1
1
1
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 13 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
2
1
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
Download