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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
218
accessible chromatin
140
candidate regulatory elements
139
target gene predictions
92
differential activity
chromatin state
46
binding sites
44
variant allelic effects
29
histone modifications
5
eQTL
2
caQTL
Date released
222
February, 2021
155
September, 2023
137
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
28
June, 2020
23
August, 2021
20
January, 2021
18
May, 2020
15
January, 2020
15
November, 2022
12
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
614
bed bed3+
325
tsv
179
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
969
Homo sapiens
Biosample type
773
primary cell
123
tissue
48
cell line
25
in vitro differentiated cells
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
658
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
617
hg19
189
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
969 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 147 more…
tissue
renal pelvis
2
19
9
1
pigmented layer of retina
20
testis
1
1
7
3
1
1
1
left renal pelvis
1
6
2
1
right renal pelvis
1
6
2
1
+ See 19 more…
cell line
EndoC_BH1
8
8
1
3
1
NT2-D1 cell
1
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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