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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
accessible chromatin
101
target gene predictions
54
chromatin state
9
gene expression
6
binding sites
4
histone modifications
1
caQTL
1
eQTL
Date released
129
November, 2021
83
February, 2024
53
September, 2022
14
January, 2020
5
October, 2019
3
August, 2021
1
February, 2023
1
January, 2022
1
May, 2020
1
May, 2022
1
November, 2019
Available data
228
bed bed3+
120
bigWig
54
bed bed9
9
tsv
2
bigBed bed9
Organism
292
Homo sapiens
Biosample type
220
primary cell
57
cell line
14
tissue
1
in vitro differentiated cells
Organ
234
epithelium
152
brain
122
connective tissue
105
kidney
96
musculature of body
93
heart
87
vasculature
80
embryo
80
lung
79
intestine
78
limb
74
blood vessel
61
pancreas
60
liver
58
uterus
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
28
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
nerve
11
skeleton
10
penis
8
lymph node
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
lymphatic vessel
5
mouth
5
vein
4
bronchus
3
breast
3
vagina
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
163
AMP
129
ENCODE
Genome assembly (visualization)
680
hg19
292
GRCh38
BIOSAMPLE
TYPE
292 results
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accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
caQTL
eQTL
primary cell
endothelial cell
11
6
1
hepatocyte
7
1
1
5
3
endothelial cell of hepatic sinusoid
6
4
6
colon epithelial cell
3
3
keratinocyte
2
2
2
+ See 72 more…
cell line
HeLa-S3
51
3
EndoC_BH1
1
colon epithelial cell
1
glomerular visceral epithelial cell
1
tissue
breast epithelium
2
esophagus squamous epithelium
2
pancreatic ductal cell
2
uterus
1
1
endothelial cell
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
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