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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
target gene predictions
91
accessible chromatin
89
candidate regulatory elements
51
gene expression
35
binding sites
27
histone modifications
20
eQTL
16
variant allelic effects
14
differential activity
7
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
119
February, 2021
88
September, 2022
69
February, 2024
52
November, 2021
22
June, 2020
18
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
406
bed bed3+
65
tsv
56
bigWig
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
496
Homo sapiens
Biosample type
260
primary cell
99
tissue
90
cell line
46
in vitro differentiated cells
1
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
420
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
422
hg19
135
GRCh38
2
hg18
files.file_type!
bed bed9
BIOSAMPLE
TYPE
496 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
osteoblast
2
5
2
2
3
2
foreskin fibroblast
2
1
6
4
2
fibroblast of lung
4
6
2
1
+ See 45 more…
tissue
adipose tissue
8
2
7
3
1
4
1
subcutaneous adipose tissue
2
2
5
6
1
1
1
3
omental fat pad
2
2
5
2
2
3
uterus
2
1
3
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
cell line
HeLa-S3
55
5
1
GM23248
1
1
2
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
adipose tissue derived mesenchymal stem cell
1
1
+ See 9 more…
in vitro differentiated cells
adipocyte
6
4
4
1
1
1
4
mesenchymal stem cell
3
1
3
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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