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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
184
target gene predictions
80
accessible chromatin
54
gene expression
49
chromatin state
44
candidate regulatory elements
33
differential activity
15
eQTL
10
variant allelic effects
5
Fine-mapped variants
3
binding sites
2
sQTL
2
variant to gene
Date released
137
September, 2022
127
February, 2024
February, 2021
47
March, 2023
42
May, 2021
22
November, 2021
20
January, 2021
16
August, 2021
16
June, 2020
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
August, 2017
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
326
bed bed3+
82
tsv
57
bigWig
44
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
481
Homo sapiens
Biosample type
192
cell line
139
primary cell
125
tissue
24
in vitro differentiated cells
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
437
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
383
hg19
199
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
481 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
chromatin state
candidate regulatory elements
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
cell line
HeLa-S3
55
3
3
1
H1-hESC
39
1
8
1
1
1
EndoC_BH1
1
8
8
3
1
H9
8
1
1
H7-hESC
2
1
1
1
+ See 13 more…
primary cell
pancreatic beta cell
2
8
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic ductal cell
3
6
3
3
1
pancreatic alpha cell
2
7
3
3
+ See 18 more…
tissue
islet of Langerhans
1
6
5
3
12
1
2
1
2
2
body of pancreas
5
2
4
4
1
1
3
pancreas
5
5
3
2
1
1
chorionic villus
4
4
4
endocrine pancreas
4
4
4
+ See 11 more…
in vitro differentiated cells
endodermal cell
2
2
2
trophoblast cell
2
1
1
cardiac mesoderm primordium
1
1
1
ectodermal cell
1
1
1
mesodermal cell
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
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