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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
188
accessible chromatin
180
target gene predictions
109
candidate regulatory elements
92
differential activity
57
chromatin state
47
binding sites
41
variant allelic effects
30
histone modifications
4
eQTL
2
caQTL
Date released
206
February, 2021
163
September, 2022
155
September, 2023
129
November, 2021
127
February, 2024
38
March, 2023
36
May, 2021
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
597
bed bed3+
326
tsv
177
bigWig
78
txt
54
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1005
Homo sapiens
Biosample type
808
primary cell
105
cell line
69
tissue
23
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
438
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
692
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
654
hg19
292
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
1005 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
7
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
endothelial cell of umbilical vein
1
4
6
5
2
1
+ See 148 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
+ See 7 more…
tissue
pigmented layer of retina
20
breast epithelium
3
5
2
esophagus squamous epithelium
2
6
2
uterus
1
2
3
1
1
endometrium cancer
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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