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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
target gene predictions
141
candidate regulatory elements
73
chromatin state
31
accessible chromatin
18
gene expression
17
eQTL
12
binding sites
11
histone modifications
6
Fine-mapped variants
6
variant allelic effects
2
differential activity
Date released
200
September, 2022
104
February, 2021
59
February, 2024
21
November, 2021
13
June, 2020
11
May, 2021
10
March, 2020
7
January, 2022
6
August, 2017
6
August, 2021
5
February, 2020
5
March, 2024
4
January, 2020
3
May, 2020
2
October, 2022
2
September, 2018
1
January, 2018
1
November, 2022
Available data
353
bed bed3+
67
bed bed9
27
tsv
17
bigWig
1
bigBed bed9
Organism
461
Homo sapiens
Biosample type
329
tissue
102
cell line
29
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
440
AMP
21
ENCODE
Genome assembly (visualization)
432
hg19
160
GRCh38
2
hg18
BIOSAMPLE
TYPE
461 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
small intestine
17
29
15
1
1
large intestine
14
27
13
1
1
adipose tissue
8
7
6
2
3
4
1
1
sigmoid colon
7
10
5
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
+ See 27 more…
cell line
HeLa-S3
55
5
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
+ See 7 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
Ishikawa
1
1
1
enterocyte of epithelium of small intestine
1
1
+ See 5 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
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