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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
151
target gene predictions
149
candidate regulatory elements
77
chromatin state
33
accessible chromatin
19
gene expression
18
eQTL
12
binding sites
11
histone modifications
6
Fine-mapped variants
6
variant allelic effects
2
differential activity
Date released
212
September, 2022
108
February, 2021
59
February, 2024
23
November, 2021
14
June, 2020
12
May, 2021
11
March, 2020
8
January, 2022
6
August, 2017
6
August, 2021
6
March, 2024
5
February, 2020
4
January, 2020
3
May, 2020
2
October, 2022
2
September, 2018
1
January, 2018
1
November, 2022
Available data
370
bed bed3+
71
bed bed9
28
tsv
18
bigWig
1
bigBed bed9
Organism
484
Homo sapiens
Biosample type
350
tissue
102
cell line
31
primary cell
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
461
AMP
23
ENCODE
Genome assembly (visualization)
453
hg19
167
GRCh38
2
hg18
BIOSAMPLE
TYPE
484 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
small intestine
17
29
15
1
1
large intestine
14
27
13
1
1
adipose tissue
8
7
6
2
3
4
1
1
sigmoid colon
7
10
5
1
ovary
6
8
4
1
1
1
+ See 28 more…
cell line
HeLa-S3
55
5
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
+ See 7 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
Ishikawa
1
1
1
enterocyte of epithelium of small intestine
1
1
+ See 6 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
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