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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
167
target gene predictions
108
candidate regulatory elements
56
chromatin state
21
accessible chromatin
20
binding sites
17
histone modifications
12
gene expression
2
eQTL
Date released
165
September, 2022
102
February, 2024
87
February, 2021
17
June, 2020
10
May, 2021
8
August, 2021
5
November, 2021
3
October, 2022
2
January, 2022
2
March, 2024
1
August, 2017
1
March, 2020
Available data
334
bed bed3+
55
bed bed9
12
tsv
4
bigWig
Organism
403
Homo sapiens
Biosample type
195
cell line
130
tissue
47
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
398
AMP
5
ENCODE
Genome assembly (visualization)
389
hg19
164
GRCh38
BIOSAMPLE
TYPE
403 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
cell line
HeLa-S3
55
5
3
1
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 17 more…
tissue
placenta
15
26
14
1
1
2
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
chorion membrane
3
3
3
1
uterus
2
3
1
1
1
1
+ See 10 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of villous mesenchyme
1
2
1
1
2
1
Ishikawa
1
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
+ See 8 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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