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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
target gene predictions
32
candidate regulatory elements
27
accessible chromatin
17
binding sites
16
histone modifications
3
variant allelic effects
2
chromatin state
1
caQTL
Date released
67
February, 2024
40
September, 2022
32
February, 2021
7
June, 2020
7
November, 2021
5
May, 2021
4
August, 2021
3
March, 2020
2
August, 2017
2
January, 2020
2
May, 2020
2
May, 2022
2
October, 2022
1
November, 2019
1
September, 2018
Available data
177
bed bed3+
30
tsv
24
bigWig
18
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
177
Homo sapiens
Biosample type
87
cell line
44
tissue
43
primary cell
3
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
170
AMP
7
ENCODE
Genome assembly (visualization)
176
hg19
85
GRCh38
1
hg18
BIOSAMPLE
TYPE
177 results
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target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
caQTL
cell line
HeLa-S3
55
5
1
HepG2
3
2
2
3
5
1
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
+ See 1 more…
tissue
liver
10
13
4
1
2
1
1
uterus
2
3
1
right lobe of liver
1
2
endometrium cancer
1
1
endometrium
1
primary cell
hepatocyte
3
1
8
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
1
1
3
1
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
1
2
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