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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
target gene predictions
46
candidate regulatory elements
19
chromatin state
11
binding sites
8
accessible chromatin
8
histone modifications
3
gene expression
1
eQTL
Date released
57
September, 2022
52
February, 2024
43
February, 2021
7
June, 2020
3
March, 2024
3
May, 2021
3
October, 2022
2
November, 2021
1
January, 2022
Available data
148
bed bed3+
19
bed bed9
3
tsv
1
bigWig
Organism
171
Homo sapiens
Biosample type
86
cell line
46
primary cell
33
tissue
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
169
AMP
2
ENCODE
Genome assembly (visualization)
167
hg19
74
GRCh38
BIOSAMPLE
TYPE
171 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
cell line
HeLa-S3
55
5
3
1
GM18507
2
1
1
1
1
EH
1
2
1
EL
1
2
1
ELR
1
2
1
+ See 2 more…
primary cell
foreskin keratinocyte
4
11
4
foreskin fibroblast
2
6
1
4
1
2
foreskin melanocyte
1
4
1
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
tissue
Peyer's patch
3
7
3
1
uterus
2
3
1
1
1
1
germinal center
1
1
1
endometrium cancer
1
1
skin of prepuce of penis
1
1
+ See 3 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
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