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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
66
accessible chromatin
49
gene expression
33
candidate regulatory elements
33
differential activity
21
chromatin state
16
eQTL
11
variant allelic effects
9
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
76
February, 2024
56
September, 2022
47
March, 2023
41
February, 2021
35
May, 2021
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
232
bed bed3+
77
tsv
56
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
356
Homo sapiens
Biosample type
131
primary cell
123
tissue
99
cell line
3
in vitro differentiated cells
Organ
935
epithelium
638
kidney
448
connective tissue
437
brain
370
musculature of body
311
lung
289
intestine
273
pancreas
250
vasculature
243
heart
237
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
85
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
314
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
263
hg19
117
GRCh38
month_released!
January, 2020
BIOSAMPLE
TYPE
356 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
11
3
13
1
2
1
2
2
2
body of pancreas
5
1
8
4
1
1
3
pancreas
5
3
5
3
1
1
1
1
endocrine pancreas
4
7
4
uterus
2
1
1
3
1
1
+ See 10 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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