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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
68
accessible chromatin
41
gene expression
33
candidate regulatory elements
21
chromatin state
15
eQTL
11
variant allelic effects
9
binding sites
8
histone modifications
3
Fine-mapped variants
1
differential activity
1
sQTL
Date released
76
February, 2024
56
September, 2022
March, 2023
41
February, 2021
35
May, 2021
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
235
bed bed3+
58
bigWig
37
tsv
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
313
Homo sapiens
Biosample type
121
tissue
97
cell line
92
primary cell
3
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
273
AMP
20
ENCODE
20
T1D
Genome assembly (visualization)
266
hg19
119
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
313 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
differential activity
sQTL
tissue
islet of Langerhans
1
6
11
3
12
1
2
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
uterus
2
1
1
3
1
1
+ See 10 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
1
8
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
primary cell
pancreatic ductal cell
3
6
2
1
1
2
pancreatic beta cell
3
8
2
1
pancreatic alpha cell
3
7
2
1
pancreatic acinar cell
3
6
2
1
pancreatic delta cell
4
5
2
1
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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