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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
68
accessible chromatin
48
gene expression
33
candidate regulatory elements
33
differential activity
21
chromatin state
16
eQTL
11
variant allelic effects
9
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
76
February, 2024
56
September, 2022
47
March, 2023
41
February, 2021
35
May, 2021
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
235
bed bed3+
76
tsv
58
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
358
Homo sapiens
Biosample type
131
primary cell
125
tissue
99
cell line
3
in vitro differentiated cells
Organ
947
epithelium
650
kidney
465
brain
458
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
316
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
266
hg19
119
GRCh38
month_released!
March, 2024
BIOSAMPLE
TYPE
358 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
11
3
13
1
2
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
uterus
2
1
3
1
1
+ See 9 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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