Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
68
accessible chromatin
50
gene expression
33
candidate regulatory elements
33
differential activity
21
chromatin state
16
eQTL
11
variant allelic effects
8
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
76
February, 2024
56
September, 2022
47
March, 2023
41
February, 2021
35
May, 2021
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
October, 2022
Available data
234
bed bed3+
78
tsv
58
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
359
Homo sapiens
Biosample type
131
primary cell
127
tissue
98
cell line
3
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
317
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
265
hg19
119
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
359 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
11
3
13
1
2
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
uterus
2
1
1
3
1
1
+ See 10 more…
cell line
HeLa-S3
55
5
3
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download